Encephalitis
Encephalitis should be suspected in any child with fever, seizures and decrease in consciousness or irritability.
- Introduction
- History
- Examination
- Differential diagnosis
- Initial investigations for all cases beyond neonatal period
- Further Investigations
- Management - older infants (>3 months) and children
- Investigation and management of neonatal encephalitis (<3...
- Contraindications to Lumbar Puncture
- Dosing regimen for intravenous aciclovir
- References
- Related Information
- Document Control
Introduction
Encephalitis should be suspected in any child with fever, seizures and decrease in consciousness or irritability.
Although this constellation of symptoms is a fairly common presentation in paediatrics, the most serious cause is HSV encephalitis, which untreated has a mortality rate of 70%. Treated, this is reduced to 20%, hence the high index of suspicion and low threshold to treat for this condition.
Other symptoms may include headaches, confusion, altered behaviour, vomiting and focal neurological deficits. There may be a history of fever and general malaise, or the onset may be quite sudden. It can be difficult to differentiate between encephalitis and other causes for the above symptoms, therefore all cases must be considered infectious and treated as such with antibiotics and aciclovir until proven otherwise.
The cause of encephalitis is only found in approximately one third of cases. This is a guideline to investigating encephalitis, which should be used in context with the clinical picture. Early discussion with the paediatric Infectious Diseases (ID) team is encouraged for immunocompromised children and those with particular travel/environmental exposure history.
History
Including:
Recent infectious symptoms eg respiratory illnesses or chicken pox, rash, diarrhoea
Travel and environmental exposures eg swimming in thermal pools, animal contact
Family illness
Previous neurological or psychiatric presentations
Baseline developmental and behavioural status
Immunisation history
Consider risk of accidental or intentional drug ingestion (prescription and non-prescription)
Examination
Thorough systems exam
Full neurological exam including eye and fundal exam, mental state
Don't forget careful skin exam for rash, lesions, neurocutaneous markers
Differential diagnosis
Bacterial meningitis
Viral meningo-encephalitis
Tuberculous meningitis
Parasitic
Immune mediated encephalitis
Demyelinating disorder
Paraneoplastic disorder
Epileptic encephalopathy
Metabolic encephalopathy
Vasculitis
Poisoning or drug ingestion
Psychiatric disorder
Initial investigations for all cases beyond neonatal period
FBC
U&E
LFT
Gas
Glucose
Lactate
Ammonia (purple tube on ice)
Blood cultures
Serology
Take 2 red tubes (10mls blood - or as much as practicable for age) and request storage for serology if needed later
Serum is stored using the Neuronal Antibody request form available on the LabTest website
Mycoplasma and EBV and serology
Mumps and measles serology if community outbreak, or unimmunised
Lumbar puncture (LP) - (if safe to do so - see below for Contraindications to Lumbar Puncture)
Take 4 tubes
MC&S, protein, glucose,
PCR for HSV, VZV enterovirus and parechovirus (pneumococcal and meningococcal PCRs are also typically included in laboratory CSF PCR panel)
Cryptococcal antigen if immune compromised
May show pleocytosis, raised protein or raised RBC count or may be normal.
Nasopharyngeal swab for PCR panel (including adenovirus, enterovirus/rhinovirus, influenza A and B, mycoplasma)
Throat and rectal swabs: enterovirus, adenovirus, parechovirus (infants) and rotavirus
EEG - looking for generalised slowing and any epileptiform activity
Neuroimaging - ideally MRI but CT if needed urgently to look for signs of raised intracranial pressure
Consider urine for toxicology
Further Investigations
To investigate the underlying cause if not yet found - consider in clinical context
This is not a routine battery of tests but is a guide in the case of a diagnosis not being reached from initial screening. Suggest prior discussion with the Infectious Diseases team and Virology lab.
It is to be used in the immunocompetent child.
Immunosuppressed children should all be discussed with the Infectious Diseases team
Second line laboratory investigations
Blood/Serology | CSF | Urine | Other |
Infective | |||
Bartonella serology HIV serology Flavivirus serology and/or PCR, with appropriate travel history - Australia (only Northern Queensland and Northern Territory) - South East Asia - Pacific Islands | Repeat HSV PCR 3-7 days into the clinical illness if the 1st sample is negative. Bartonella, PCR, CMV, HHV6, Toxoplasmosis PCR - especially if immunocompromised or if MRI features are suggestive. | Stool for enterovirus and parechovirus PCR Skin lesions if present, swab for VZV, HSV, enterovirus | |
Metabolic | |||
Glucose Lactate Amino acids Pyruvate Ammonia TFTs Copper/ceruloplasmin | Glucose Lactate Amino acids Pyruvate | Organic acids Amino acids | |
Immune-mediated / Inflammatory | |||
Oligoclonal bands ESR ANA, rheumatoid factor Auto antibodies (limbic encephalitis panel, Anti GAD, VGKC, Anti NMDAR antibodies) - discuss with neurology | Oligoclonal band (paired with serum sample) | ||
Others | |||
Tumour markers Lead | Toxicology screen |
See Laboratory Guide for help with lab investigations
Other investigations
MRI/MRA - consider MRI spectroscopy if possible metabolic disorder
Management - older infants (>3 months) and children
Initial treatment
Start aciclovir and broad spectrum antibiotics intravenously for any child where there is a suspicion of encephalitis.
Where possible perform the above initial investigations including lumbar puncture (LP) prior to starting treatment. See below for contraindications to LP. If LP is not possible at the time it should be performed as soon as safely possible to allow informed decisions to be made about the duration of treatment.
A normal LP does not exclude encephalitis and HSV PCR can be negative on a first lumbar puncture even with HSV disease. If there is clinical suspicion aciclovir should be continued until further investigations including a second LP have been performed. Antibiotics should be continued until cultures are negative.
The child should be kept adequately hydrated but with judicious use of fluids, bearing in mind the risk of SIADH and cerebral edema. See Intravenous Fluids guideline.
Baseline renal function should be measured and this should be monitored for the duration of aciclovir treatment. See below for safe usage of aciclovir.
Duration of treatment
HSV PCR positive cases should be given a minimum of 14 days of IV acyclovir (minimum 21 days under 3 months of age or if immunocompromised), with LP at end of treatment course for repeat HSV PCR prior to stopping acyclovir.
Oral aciclovir or valaciclovir are not valid alternatives.
In the case of suspected encephalitis where the cause has not been identified, LP should then be repeated after 3-4 days for second line investigations including repeat PCR for HSV, and consider repeating EEG and neuroimaging.
If these are again normal, and there are no abnormalities on EEG or neuroimaging consistent with HSE, and the child has clinically completely recovered, the aciclovir could be stopped.
In any child who clinically has had an encephalopathy, where there is either:
Abnormal EEG
Abnormalities on neuroimaging
Incomplete recovery
then aciclovir should be continued for 21 days (even if the CSF was normal).
Convalescent serology should be taken 2-3 weeks after the initial serology was taken in any child where the cause has not been identified.
Any cases that are not straightforward should be discussed with the Neurology team and the ID team.
It is important to document carefully any decisions made to stop or start treatment and the reasons behind them.
Investigation and management of neonatal encephalitis (<3 months)
Neonatal encephalitis can be even more difficult to diagnose clinically as the symptoms can be even more non-specific. There may or may not be a history of genital herpes in mother or father, or of cold sores. Many genital infections will be asymptomatic and up to 60% of HSV meningitis there is no parental history of herpes.
A very low threshold for treating with aciclovir in an infant with fever without focus should be maintained if no other cause can be found. If aciclovir is commenced ensure that HSV PCRs have been requested on CSF and blood. Any infant with skin lesions suggestive of HSV should have a lumbar puncture to look for CNS disease as well as viral skin swabs for HSV. Elevated liver transaminases are an important clue for disseminated herpes simplex in neonate with fever without focus.
A positive result should prompt discreet and sensitive counselling of parents and investigations as warranted.
CSF in infants is more likely to be normal or only mildly abnormal, and PCR has been shown to be only 70% sensitive early in infection. Therefore LP should be repeated in the first week if initial results are normal.
Duration of treatment should be minimum 21 days. LP should be repeated just prior to 21 days to ensure clearance (negative HSV PCR). If the virus is not cleared treatment should be continued. Discuss these cases with the ID team.
Once the virus has been shown to be cleared the treatment can be stopped. However neonatal HSV CNS disease has a high relapse rate. Any recurrence of skin rash should prompt a repeat LP, as should any presentations suspicious for encephalitis, and further IV aciclovir.
Cases of HSV encephalitis, disseminated HSV or skin-eye-mouth disease are all recommended to receive aciclovir 300mg/m²/dose orally TID for 6 months as suppressive therapy (Kimberlin et al. 2011).
Investigations for infectious causes of encephalitis in the neonatal period
CSF:
Culture to include Listeria monocytogenes
HSV1 and 2, toxoplasmosis, CMV, enterovirus and parechovirus PCR
VDRL if congenital syphilis suspected.
Blood:
Culture
Syphilis, HIV, toxoplasmosis, CMV serology
HIV and HSV PCR
Contraindications to Lumbar Puncture
(see also Meningitis guideline)
Deteriorating level of consciousness or GCS < 13 or fluctuating level of consciousness
Focal neurological deficits e.g. Pupillary dilatation, ocular palsy, asymmetry
A recent fit within 30 minutes, focal or prolonged fit > 30 minutes duration
Abnormal posture of movement (decerebrate, decorticate, cycling)
Inappropriately low HR, elevated BP, irregular respirations (ie. signs of impending brain herniation)
Papilloedema
Impaired oculocephalic reflexes (Doll’s eyes reflexes)
Abnormal coagulation tests – INR >1.5 or platelets < 50
Septic shock or haemodynamic instability
A bleeding diathesis or widespread purpura
Skin sepsis at the LP site
Note that a normal head CT scan does not exclude the presence of raised intracranial pressure and should not influence your decision to perform a lumbar puncture; this is a clinical decision.
Dosing regimen for intravenous aciclovir
See also the New Zealand Formulary for Children
Neonates and infants up to 3 months | 20mg/kg/dose 8 hourly |
Children 3 months to 12 years | 500mg/m2/dose 8 hourly (or 20 mg/kg/dose 8 hourly) |
12 years and over | 10mg/kg/dose 8 hourly |
Note:
Toxic to veins so a central venous catheter is advised for long courses.
Check baseline renal function and monitor frequently.
Avoid using in conjunction with ceftriaxone as this can increase the chance of renotoxicity.